Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFKGFDKDFNITDKVAVVTGAASGIGKAMAELFSEKGAYVVLLDIKEDVKDVAAKINPSRTLALQVDITKKENIEKVVAEIKKVYPKIDILANSAGVALLEKAEDLPEEYWDKTMELNLKGSFLMAQIIGREMIATGGGKIVNMASQASVIALDKHVAYCASKAAIVSMTQVLAMEWAPYNINVNAISPTVILTELGKKAWA-----GQVGEDMKKLIPAGRFGYPEEVAACALFLVSDAASLITGENLIIDGGYTIK
2D1Y Chain:C ((7-246))
--------------KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGA---FFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT--
General information:
TITO was launched using:
RESULT:
Template:
2D1Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159291 for 2092 contacts (-76.1/contact) +
2D Compatibility (PS) -25456 + (NN) -9029 + (LL) 1156
1D Compatibility (HY) -14000 + (ID) 4550
Total energy: -211170.0 ( -100.94 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_2D1Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D1Y-query.scw
PDB file :
Tito_Scwrl_2D1Y.pdb
: