Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFAEYLAEIENPDHRARTQEVLTWVAETFPDLKPEIKWN--TPMFTNN----GTFIIGFSIAK--QHMSVSPEVA----GIERFEADIKEAGYSH-TKGIFRITWAKSVDYDLLAKIIKFNIQDKANYTSFWRV
2A1V Chain:A ((8-117))
-----------------QTVDDLRSVCD-ELPHSLETFPFDDETLVFKVGYLSKSRMYALTDITQDPLRLSLKVDPERGEELRQAHPQSIA-PGYHLNKKHWVTVTLDGTVPAELLGELLRGSYLLVTK-------
General information:
TITO was launched using:
RESULT:
Template:
2A1V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40726 for 663 contacts (-61.4/contact) +
2D Compatibility (PS) -10083 + (NN) 304 + (LL) 2460
1D Compatibility (HY) -6400 + (ID) 650
Total energy: -55095.0 ( -83.10 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_2A1V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A1V-query.scw
PDB file :
Tito_Scwrl_2A1V.pdb
: