Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------MATQKNLVDLATKAYIYGFPFIFNTQQIERYVTVGIGGTKQVPFNNFTHASRLAEPSDKFVSVNNDTIYSNA-PIDVSAG--PVVLSVPDTSGRYYVLQFVDAWS------NNFAYVGKRATGTSAGKFLLTPPNWNGDVPADMIE---IKFPTNI---GIIIGRLACDGEADLPTVRELQEQLKITPLNEGKEVDGFPEYDRSLGKELA------FFEQLRVYMAQFPPAERDLVKQESFAPIGLMEKGVSPYSNPSEELK---NALIEGAKAGLANIKKATTNFKSEN---GW-GLTQHLFDYNADFFEIGTKKSLDWVIEDREEAYIIRAVSAITALWGNHGYEAVYL---MTWTDTDGNALNGKNKY-----TLELNPIPPVDSFWSITM--YDLPEY--------FLCENPINRYSIGD---RTPGIQYNDDGGITIVVSKDEPTDPKERANWLPAPDAEFRPMFRLYNPQQPLVDGSYHFPGFEKK---- |
| 4JE5 Chain:A ((5-502)) | TLPESKDFSYLFSDETNARKPSPLKLFQDPNIIFLGGGLPLKDYFPWDNLSVDSPKPPFPQGIGAPIDEQNCIKYTVNKDYADKSANPSNDIPLSRALQYGFSAGQPELLNFIRDHTKIIHDLKYKD-WDVLATAGNTNAWESTLRVFCNRGDVILVEAHSFSSSLASAEAQGVITFPVPIDADGIIPEKLAKVMENWTPGAPKPK-LLYTIPTGQNPTGTSIADHRKEAIYKIAQKYDFLIVEDEPYYFLQMNPYIKDLKEREKAQS--------SPKQDHDEFLKSLANTFLSLDTEGRVIRMDSFSKVLAPGTRLGWITGSSKILKPYLSLHEMTIQAP---------AGFTQVLVNATLSRWGQKGYLDWLLGLRHEYTLKRDCAIDALYKYLPQSDAFVINP-PIAGMFFTVNIDASVHPEFKTKYNSDPYQLEQSLYHKVVERGVLVVPGSWFKSEG-------ETEPPQPAESKEVSNPNIIFFRGTYAAVSPEKLTEGLKRLGDTLYEEFGIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 39277 for 3105 contacts (12.6/contact) +
2D Compatibility (PS) -42217 + (NN) 1771 + (LL) 2584
1D Compatibility (HY) -6000 + (ID) 4100
Total energy: -8685.0 ( -2.80 by residue)
QMean score : 0.086
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