Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MPKSEIRKLLQEIKKQVDNPGNSSTTEIKKMASEAGIDEQTAEEIYHLLTEFYQAVEEHGGIEKYMHSNISWLKIELELLSACYQIAILEDMKVLDISEMLSLNDLRIFPKTPSQLQNTYYKLKKELIQVEDIPKNKPGRKRKTQKNTKKEKTNIFGKVVPAEFKAPASIKEQISYDKSREKNLVDLLSGVKSNVQLLSENQGEENNVYDLLKSIYSLSSLAVQKEELDKKYQDLQTKCQELEQENSYLKQQNETMTDSFHTLVLQVADFAYASDLDQIQALPLFSQQLVVTLNQLGVFKENYKQM |
| 3H4C Chain:A ((9-228)) | VVLHPTMLNCMRGLHKK------------------AVLPEPVLDRGIELARAFVGGRRARG----------QRVERQPDVAAACLMIAAEEAQQPLPLAEVRCLD------SSLGDVELRRADIVREL-----------HLEDSERRLRDTFADNLLVKYILK-----------LGLQVSLYLPHCKRLLTALGRVEALAGLTVADRVTTALL---LARTAQTLSWEGMEAIYANFSSKA------HLEVTKVNKIMHLAVDVLPLIQAAFQ----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22508 for 1627 contacts (-13.8/contact) +
2D Compatibility (PS) -21947 + (NN) -9045 + (LL) 7092
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -55658.0 ( -34.21 by residue)
QMean score : 0.470
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