Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPEKLDTVLGYLKEFPDYYKYVTKKTYTLNEKIIFEDEKAKSIFFIVEGYAAVEL-EDNLRKTNYISIFVLPYNVLGIDAFSSYPKKKHSITVMSESLMLYKIDADFLLNILSI-----KPDVNDFLLTSIADVFARHYALLGM-IAKTPKERIYMALENLAVEMGTEDEERNEIVLPNFINQSVLARYCRTTQPNISNLLTELVEEEFLINKK-SPYRIDKDSLDI
3IWZ Chain:A ((30-228))
-----------------FLAHSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDD--DRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSH-PQGTQL--RVSRQELARLVGCSREMAGRVLKKLQADGLLHARGKTVVLYG------
General information:
TITO was launched using:
RESULT:
Template:
3IWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115513 for 1352 contacts (-85.4/contact) +
2D Compatibility (PS) -20595 + (NN) -3177 + (LL) 1360
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -142675.0 ( -105.53 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_3IWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IWZ-query.scw
PDB file :
Tito_Scwrl_3IWZ.pdb
: