Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIYLDNEDVLDQAYNFAMEEYALRSLDENETYFMFYRMKPTIIVGKNQNTLEEINHPFVKDHHIDVLRRLSGGGAVYNDEGNISFSMITKDDGNSFQNFAKFTEPVIRALRKLGVNAELSGRNDIEV----NGKKISGNAQFATKGRLYSHGTLLFDVDLSMLEKALQVDPEKYLSKGVKSVRSRVTTIREHLAEDIDILTFKQILLESIFETKDIPR--YTFTE---ADKQGIEKLRTERYRNWDWTYGKSPKATIKRKKRFPAGTIEFQVSLEKGQVKEATIYGDFFGTEDVAELAEKIIGCRFERKSIQNAWQEINAKDYFGGIEKEAILDMLFE |
| 3A7R Chain:A ((3-333)) | LRLLI-SDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPE---YDKTISTSIVLNALNALGVSAEASGRNDLVVKTVEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLP-GITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPNFAETFAR-QSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123368 for 2645 contacts (-46.6/contact) +
2D Compatibility (PS) -34867 + (NN) -12885 + (LL) 252
1D Compatibility (HY) -18800 + (ID) 4750
Total energy: -194418.0 ( -73.50 by residue)
QMean score : 0.495
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