Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPATGELVVGAT-KQAEQAFKNLAAVLEEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSSDFPARSAFQVAKLPLDAEIEIEVIAEA
1ONI Chain:D ((5-128))
LIRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIEAVA--
General information:
TITO was launched using:
RESULT:
Template:
1ONI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44266 for 920 contacts (-48.1/contact) +
2D Compatibility (PS) -13618 + (NN) -7529 + (LL) 248
1D Compatibility (HY) -13200 + (ID) 2900
Total energy: -81265.0 ( -88.33 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1ONI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ONI-query.scw
PDB file :
Tito_Scwrl_1ONI.pdb
: