Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQVAPFYADHVGSILRTK---GIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYD----------------------AAGGIQFSKVQTKSHSVKITGP-IDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDIEYQPYLDDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNERSGDFAPLKY-VTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFASTEEGN----ILT------EEEQWDKLRYVVRLANDIWGE |
| 2NQ5 Chain:A ((1-395)) | ------LTKVSSLGYPRLGENREWKKLIEAYWAGKVSKNDLFAGAKELRLDFLKKQLNAGLDLIPVGDFSLYDHILDLSVQFNIIPKRFAKEPIDIDLYFAIARGNKENVASSMKKWFNTNYHY-IVPEWSKQRPKLNNNRLLDLYLEAREVVG--DKAKPVITGPITYVALST-----GVEDFTAAVKSLLPLYKQVFTELVKAGASYIQVDEPIFVTDEGK--------------DYLQAAKAVYAYFAKEVP-DAKFIFQTYFEGLI----------D-SQVL-SQLPVDAFGLDFVYGLEENLEAIKTGAFKG-KEIFAGVIDGRNIWSSDFVKTSALLETIEEQ--SAALTIQPSCSLLHVPVTTKNETDLDPVLRNGLAFADEKLTEVKRLAEHLDG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70958 for 2787 contacts (-25.5/contact) +
2D Compatibility (PS) -34220 + (NN) -10649 + (LL) 2376
1D Compatibility (HY) -7200 + (ID) 2850
Total energy: -123501.0 ( -44.31 by residue)
QMean score : 0.475
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