Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSILVTGANGQLGTELVQLLKEHN-------LTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFG---KYGNNFVYSML-KLAETHKELKVVNDQLGRPTYTYDLADFIRFVIEK---NPAY-GIYQFSNSGTATWFEFATEILKDKDVT---VNPCTSDEFPQKAERPKTSIMSLEKVEKLGFNIPTWQDALVRFKK |
| 2YDX Chain:E ((5-278)) | --VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQ-PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPIT-DSPVLGAQRPRNAQLDCSKLETLG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103121 for 2080 contacts (-49.6/contact) +
2D Compatibility (PS) -27815 + (NN) -10180 + (LL) 1672
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -157044.0 ( -75.50 by residue)
QMean score : 0.498
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