Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELTKENFQKLDLIHLSLENRHSMSEIIDILSESYIEITQSGVVKDYAYYKSLTTLG---DSNLAIMEYDVKILDETKVLSYYKLKNLS--EN----NYTMRSNIWIFENGSWKLTFHQGTRII
2R4I Chain:A ((1-122))
GMNQRDVILDCEKKLLTAIQNNDVESLEVLLHDDLLFIIPSGETVTKETDIAAYSSGKIALRAVVPSDYIIRIIHD-TVVVSVNIEIKGEYMEHTLDNTFRYLRVWKLFDGNWKVIAGSCTAI-
General information:
TITO was launched using:
RESULT:
Template:
2R4I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13889 for 732 contacts (-19.0/contact) +
2D Compatibility (PS) -12146 + (NN) -193 + (LL) 256
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -28372.0 ( -38.76 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_2R4I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R4I-query.scw
PDB file :
Tito_Scwrl_2R4I.pdb
: