Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --LSQMSILEKIKDAGVVGCGGA-GFPTHAKFSGEVEYL--IINAAECEPLLKTDHFVMRN--HAVETIKAIEMVKSQVGAEFAVIATKRYYTEEIAALRSAITELDASVTIHEMDNVYPTGDEQVMVFEVTGRVVPPSGIPLMVGCIVSNVSTMWNVFHAIQDDAPVVRK----QLTVTGAVGEPKLLDVPVGTPFEVCLAAAGGTNLDEYLFLDGGPMMGKLNDQSTIADKVVTKTTSGLIVAEDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRQQLGHDIHPHKVMRHFAVAEDITDIKPDPIWEEAMICCECGICEVIACPMGLSPRQVNIHVKKELLKQG----VRYQTDKKEFTPDPMREYKSIAPKNILIKMGLQQYADVHLEKMHYLEVDEVFIPTKMHIGAPSIPVVSEGDIVKKGDLIAKIPDTALGANIHASIDGQI----IRITEEQVHIKKVMS |
| 1SQ9 Chain:A ((3-395)) | KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIE----RDAFELCLVATTSF-SGDLLFYRITREDETKKVIFEKLDLL----DSDMKKHSFWALKWGASNSHRLVATDVKGTTYIWK-FHPFADESNSLTLNWSPTLELQGTVESPM---TPSQFATSVDISERG---------------------------LIATGFNNGTVQISELSTLRPLYNFES----QHNNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI---GSLSVPGEFAHSSWVMSLSFNDSG-----------ETLCSAGWDGKLRFWDVKT----------------KERITTLNMHCDDI--------EIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR------SGMGADLNESLCCVCLDRSIRWFREAG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108517 for 2974 contacts (-36.5/contact) +
2D Compatibility (PS) -37111 + (NN) 3939 + (LL) 5924
1D Compatibility (HY) -5600 + (ID) 3250
Total energy: -144615.0 ( -48.63 by residue)
QMean score : 0.153
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