Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS |
| 2YZY Chain:A ((6-200)) | QSAQEILDRVEKNLSTPWQATVQ----GRIEEELLARVYAL----PQARLFRVEFLKPGSL---EGNFTVITEKEVWNYLYLTNQLVISPQVDLRLEGEVRLPEGMAWKLVGRSQGFAAMELYILKAD----------------PRPLRFVFLDEKGKVLADLKVVEFKRTNLTEAQLKRYPKD---------------------AQVVRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YZY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 37488 for 1069 contacts (35.1/contact) +
2D Compatibility (PS) -17228 + (NN) -3554 + (LL) 3828
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: 13284.0 ( 12.43 by residue)
QMean score : 0.231
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