Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKITTASHGGNYNELAKQHGLTKEMVLDFSANINPLGVPASLKQTITANLDKLVEYPEPDYLALRARIASFHQLDLANVIPGNGATELIFGIAKVT--KAQKVLLLAPTFAEYERAFFDA--EIVYAELTKETNFAAVEIVLEILER-DTEIEAVCLCNPNNPTGQLIAQQEMIKIADLCEKRNIYLIIDEAFMDFLEENE---TISMINNLERFPHVAIIRAFTKFFAIPGLRLGYLLTKNDLLAEALMQMREPWSINTFADLAGQMLLEDEAYIRQTFDWINEERDFLYRGLSRFSALTVYRPTVNYIFFHLEKP--LDLRKELLLKGIFIRSCANYRGLTENYYRVAVKSRADNSQLLTALEVIFSGN |
| 3GET Chain:A ((11-364)) | --LSNYEPGKDIEVIAKEY--GVKEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSIT---HN-LDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNE-DCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNLKSYG---LNAIRITIGTSYENEKFFTEFDKIL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261910 for 2862 contacts (-91.5/contact) +
2D Compatibility (PS) -38357 + (NN) -23661 + (LL) 392
1D Compatibility (HY) -20000 + (ID) 3750
Total energy: -347286.0 ( -121.34 by residue)
QMean score : 0.529
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