Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQA-ELEQIQQQLFDAGGDLAT-EEGKRAYKLTSE-PVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
2R6X Chain:B ((9-187))
--IYTKNGDKGQTRII--QILYKNDPRVAAYGEVNELNSWVGYTKSLINSHTQVLSNELEEIQQLLFDCGHDLATP---RHSFKFKQEQPTVWLEEKIDNYTQVVPAVKKFILPGGTQLASALHVARTITRRAERQIVQLMREEQINQDVLIFINRLSDYFFAAARYANYLEQQPDMLYR-----------
General information:
TITO was launched using:
RESULT:
Template:
2R6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61619 for 1300 contacts (-47.4/contact) +
2D Compatibility (PS) -18215 + (NN) -9532 + (LL) 708
1D Compatibility (HY) -16000 + (ID) 4500
Total energy: -109158.0 ( -83.97 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_2R6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R6X-query.scw
PDB file :
Tito_Scwrl_2R6X.pdb
: