Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLGNDWDELLKNEFNQPYYLTLRQFLKKEYQTKKVFPDMYDIFNALKHTAYKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNCEI-PNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPIDWQIPSI
3FCF Chain:A ((4-221))
---FGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWK----
General information:
TITO was launched using:
RESULT:
Template:
3FCF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97008 for 1751 contacts (-55.4/contact) +
2D Compatibility (PS) -23211 + (NN) -9623 + (LL) 716
1D Compatibility (HY) -19200 + (ID) 5600
Total energy: -153926.0 ( -87.91 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_3FCF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FCF-query.scw
PDB file :
Tito_Scwrl_3FCF.pdb
: