Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNPTKEEIQHILKKAKVIAVVGLSDKPDRTSYRVSQIMQQAGYKIIPVNPNAD--EILGEKTVKHLTDIEEHVDIVNVFRRSEFLPEIAEAFDQIDADVFWAQLGIANQEAFDFLTEKGYPTVMDYCIKVAYQEMD
2DUW Chain:A ((2-133))
----KENDIAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLGVINEQAAVLAREAGLSVVMDRCPAIELPRL-
General information:
TITO was launched using:
RESULT:
Template:
2DUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85102 for 1011 contacts (-84.2/contact) +
2D Compatibility (PS) -14327 + (NN) -3571 + (LL) 32
1D Compatibility (HY) -11200 + (ID) 2550
Total energy: -116718.0 ( -115.45 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_2DUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DUW-query.scw
PDB file :
Tito_Scwrl_2DUW.pdb
: