Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKLFRQDENILNSELAEDLPI--PRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL
4H3C Chain:A ((15-239))
----------------------AHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAF---------------MELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANR-------
General information:
TITO was launched using:
RESULT:
Template:
4H3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102098 for 1564 contacts (-65.3/contact) +
2D Compatibility (PS) -22606 + (NN) -7655 + (LL) 2572
1D Compatibility (HY) -12800 + (ID) 4850
Total energy: -147437.0 ( -94.27 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4H3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H3C-query.scw
PDB file :
Tito_Scwrl_4H3C.pdb
: