Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFLWFNLGSPDMVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK---- |
1ZXA Chain:A ((9-44)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ZXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 8683 for 118 contacts (73.6/contact) +
2D Compatibility (PS) -3737 + (NN) -2894 + (LL) 21536
1D Compatibility (HY) -1200 + (ID) 500
Total energy: 21888.0 ( 185.49 by residue)
QMean score : 0.520
|
|
|