Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLER---ETVTKRALLSILLETNSEKYPTQTDFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVSDGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEGIYDDKIRFASKRLVEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDTIEIFICGDVTKEEVMPLI-EKMAFSPRPERKGIFYTKEA--PKEVRVIHEQQAINQGKLVLGYQTETLFGDDDFVALQLANGLLGG---------FANSKIFINVREKASLAYYASSRID--SFKGYMIISAGIDEVNYEQALKIIEEQVVAMKQGNFTDDELNQTKEMLINQLLETNDQAQGLIELVYNNVL-RDANLDLENWIAKIKQATKEEVVAAINKIKPD-T-IYFLSKGGEELHGKNHI |
| 1PP9 Chain:A ((15-432)) | ----QVSQLDNGLRVASEQSS-QPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPG-NALEKEVESM-GAHLNAYSTRE----HTAYYIKALSK--------DLPKAVELLADIVQNC-----SLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQICHREDGLPLAHVAIAVEGPG-WAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLAS-IAATNKLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLC-TSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQCPAVAGFGPIEQLP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157789 for 3309 contacts (-47.7/contact) +
2D Compatibility (PS) -43584 + (NN) -23627 + (LL) 888
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -239912.0 ( -72.50 by residue)
QMean score : 0.478
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