Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIENASFGLTNCAERTAIFKAVSEGKRDFKQLVVVADTDGPVSPCGACRQVISEFCAPDMPVILTNLTGKTATVTVKELLPGAFTSEDML
1UX1 Chain:B ((1-130))
MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNHAEQTALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDL-
General information:
TITO was launched using:
RESULT:
Template:
1UX1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80205 for 1030 contacts (-77.9/contact) +
2D Compatibility (PS) -14443 + (NN) -5946 + (LL) 176
1D Compatibility (HY) -13600 + (ID) 4050
Total energy: -118068.0 ( -114.63 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1UX1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UX1-query.scw
PDB file :
Tito_Scwrl_1UX1.pdb
: