Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----LTLLDKLNEDMKQAMRDKEKEKLSVIRMLKAALQNEAIHQGVKDLTPDDEVTVI------SREL--KQRRDSLAEFDKAGRSDLSDKVRSEIVIVEDYAPKQLTPEELENIVKATIEEVGASSKADFGKVMSAI-MPKVKGKADGGAVNQFVKKYLS----- |
| 4DVK Chain:A ((1-157)) | ENITQWNLQDNGTEGIQRAMFQRGVN-----RSLHGIWPEKICTGVPSHLATDTELKAIHGMMDASEKTNYTCCRLQRHEWNKHGWCNWYNIEPWILLMNKTQANLTEGQPLRECAVTCRYD-----RDSDLNVVTQARDSPTPLTGCKKGKNFSFAGILVQGPCNF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 38975 for 979 contacts (39.8/contact) +
2D Compatibility (PS) -14079 + (NN) 2499 + (LL) 848
1D Compatibility (HY) -1200 + (ID) 1250
Total energy: 25793.0 ( 26.35 by residue)
QMean score : 0.039
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