Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNTKGKKITIIISIIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDI--STILEDKKVINNASIFSFYVKYNNDTNLKAGNYELSPAMNTDQIVKKMQEGKTVAPAK-LVIPEGYTLDQIADR-IVAYQPKLKKADVLKTMDDPEFVASMI-KAYPETV-TNDVLNKSIKHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDELTKQK-MSVHKFLTMSSIIEKEATENVDRKMIASVFYNRLAKDMRLQTD-PTVLYALGEHKSKTTYKDLE-VDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEKSDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN |
2PV7 Chain:A ((13-292)) | ----GFKTINSDIHKIVIVGGYGKLGGLFARYLR----------------ASGYPISILDREDWAVAESILANADVVIVSV----------------PINLTLETIERLKPY---LTENMLLADLTSVKREPLAKMLEVHTGA--------------VLGLHPMFGADIASMAKQVVVRCDGRFPERY----------------EWLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTFANGLHLSKQPIN--LANLLALSSPIYRLELAMIGRLFA----QDAELYADIIMNLAVIETLKQTYDEALTFFENNDRQGFIDAFHKVRDWF--------------GDYSEQFLKESRQLLQQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58315 for 1848 contacts (-31.6/contact) +
2D Compatibility (PS) -27637 + (NN) 3354 + (LL) 5488
1D Compatibility (HY) -5600 + (ID) 1550
Total energy: -84260.0 ( -45.60 by residue)
QMean score : 0.167
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