Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPLILIILGSVLCGCLIIFFLNIAKSRGMKKKVKQLTTEKAELERQLAAAKAMKTHSSKVEKRDTENAVDTTK
3AZD Chain:A ((8-33))
--------------------------------------------------------------------AVRRKIRSLQEQNYHLENEVARLKKL--------------------
General information:
TITO was launched using:
RESULT:
Template:
3AZD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5462 for 109 contacts (50.1/contact) +
2D Compatibility (PS) -3072 + (NN) -2621 + (LL) 8652
1D Compatibility (HY) -2400 + (ID) 300
Total energy: 5721.0 ( 52.49 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_3AZD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AZD-query.scw
PDB file :
Tito_Scwrl_3AZD.pdb
: