Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSY---QNRG--KHIITSSIEHPSVRVVMEEL-EQEGFTVKYLPVDK-NGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEML---------SVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKR---KNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEA-LIEIRDYLLTKIAQMSDMTVHTKQSVAA----PHIVCFSAKGH--RGEILVHALEKEDIYISTTSAC-SSKQKLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK |
| 3A9Z Chain:B ((20-432)) | -VYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQ----TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVL--AQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147738 for 3280 contacts (-45.0/contact) +
2D Compatibility (PS) -40685 + (NN) -19412 + (LL) 256
1D Compatibility (HY) -20400 + (ID) 6600
Total energy: -234579.0 ( -71.52 by residue)
QMean score : 0.462
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