Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKAISSNLGYPRLGEKREWKRALEKFWNGAISEEELLAETKALRLHALKKQQEKGIDLIPVGDFSFYDQVLDTSVTFGIIPKRFQHDGGKVSLNTYFDIARGKSDAVASEMTKWFNTNYHYIVPELADADPKVLDNRALYYYEEAKKELGIEGKPVLVGPVTYLKLGKGNDAENFEALLDKFIPAYVEILKELERAGAKWVQIDEPYLATSFDKSEIKLFEKVYQAFQTAVPNLKIELQTYFESLDYYEEVV-NLPVAAIGIDFVHDHGDSLEALKAHGFPEDKYLAAGVIDGRNVWRSDLDAKLSLLTEIADYVTDGKLIVQPSNSLLHVPVTKLSEPDLDEVILGGLSFADQKLDEIAILTKALTDGAESVTAELEDARAAVTALNESSHRNNLEVQEAIANLGNVRVDRELPFAERIKLQHAWLNLPLFPTTTIGSFPQSPEVRKTRADWLKGNITDAEYNAFIEKETARWIKIQEELDIDVLVHGEFERTDMVEYFGQKLAGFQATKFGWVQSYGSRAVRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWEKYLNDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEEVTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRKEPETIAALQDMIKATKEVRAEYQVLEK |
2NQ5 Chain:A ((1-742)) | --LTKVSSLGYPRLGENREWKKLIEAYWAGKVSKNDLFAGAKELRLDFLKKQLNAGLDLIPVGDFSLYDHILDLSVQFNIIPKRFAKEP--IDIDLYFAIARGNKENVASSMKKWFNTNYHYIVPEWSKQRPKLNNNRLLDLYLEAREVVGDKAKPVITGPITYVALSTGV--EDFTAAVKSLLPLYKQVFTELVKAGASYIQVDEPIFVTDEGKDYLQAAKAVYAYFAKEVPDAKFIFQTYFEGLID-SQVLSQLPVDAFGLDFVYGLEENLEAIKTG-AFKGKEIFAGVIDGRNIWSSDFVKTSALLETIEEQ--SAALTIQPSCSLLHVPVTTKNETDLDPVLRNGLAFADEKLTEVKRLAEHLDGREDP---AYDLHIAHFDALQAADF-RNV----KLEDLSRVATKRPSDFAKRRDIQQEKLHLPLLPTTTIGSFPQ-----------------DAEYKQFIQAEIERWIRIQEDLDLDVLVHGEFERVDMVEFFGQKLAGFTTTKFGWVQSYGSRAVKPPIIYGDVQHLEPITVEETVYAQSLTDRPVKGMLTGPITITNWSFERTDIPRDQLFNQIGLAIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMCYSKFDEIIDAIRALDADVISI-------------------LGIGLGVYDIHSPRVPTKEEVVANIERPLRQLSPTQFWVNPDCGLKTRQEPETIAALKVLVAATKEVRQK------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2NQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -248237 for 6194 contacts (-40.1/contact) +
2D Compatibility (PS) -75898 + (NN) -34325 + (LL) 4400
1D Compatibility (HY) -73600 + (ID) 19550
Total energy: -447210.0 ( -72.20 by residue)
QMean score : 0.518
|
|
|