Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLVGFDIDLAKAVFAEYGIKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPEL--YDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSDKELQKKINEAFEKLYKEGKMQEISKKWFGDDEIAKQ |
| 2Q2A Chain:B ((42-264)) | ------------------------------------KKVVVGTDAAFAPFEYMQKG-KIVGFDVDLLDAVMKAAGLDYELKNIGWDPLFASLQSKEVDMGISGITITDERKQSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQN-ATTGQEAAEK-------LFGKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQVIEDPKNFASEYYGMIFPKNSELKAKVDEALKNVINSGKYTEIYKKWFGKE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82928 for 1834 contacts (-45.2/contact) +
2D Compatibility (PS) -24468 + (NN) -14734 + (LL) 4068
1D Compatibility (HY) -16000 + (ID) 3600
Total energy: -137662.0 ( -75.06 by residue)
QMean score : 0.461
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