Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIAIFASGSGSNFQALVDDEF---IKPYVKLLVCDKPNAYVLERANKHDIPVFLFEAKNYPDKEAFETEILLELRRLEIDLLVLAGYMRLIGPTLLAEFPEQIVNLHPSLLPEFKGKDAIGQAIQANVSGTGVTAHFVDAGMDTGPIIDQVKVTIETAETTDTLAEKIHQVEHIFYPKVIR----GLIQNGGND
1ZLY Chain:A ((3-194))
--VAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGEN-
General information:
TITO was launched using:
RESULT:
Template:
1ZLY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138421 for 1459 contacts (-94.9/contact) +
2D Compatibility (PS) -20560 + (NN) -14016 + (LL) 52
1D Compatibility (HY) -15600 + (ID) 3250
Total energy: -191795.0 ( -131.46 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_1ZLY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZLY-query.scw
PDB file :
Tito_Scwrl_1ZLY.pdb
: