Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQVTEGGDKFAIELAALFHDYNDSKLTED--PLQ-ATEIITTWLRE--KEIPEDVISKIIRIIQAVSFKNGKNPIQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANR--------D-HPENTTLQHFYDKLLLIQTQLKTKTGRELAGEKQIIMQDFIHALEKELKI
3GW7 Chain:A ((4-214))
---QHWQAQFENWLKNH---------VCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVS------QRSSILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQI---APLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDD--YALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELA-
General information:
TITO was launched using:
RESULT:
Template:
3GW7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35821 for 1326 contacts (-27.0/contact) +
2D Compatibility (PS) -18344 + (NN) -1860 + (LL) 1200
1D Compatibility (HY) -11200 + (ID) 2900
Total energy: -68925.0 ( -51.98 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_3GW7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GW7-query.scw
PDB file :
Tito_Scwrl_3GW7.pdb
: