Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQAISLVDGLLLTGGQD-ITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK |
2A9V Chain:A ((25-204)) | --------------------------WTHREWRVLRELGVDTKIVPNDID---SSELDGLDGLVLSGGAPNIDEE------LDK-----------LGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKHP--------------EFGKTKVSVMHSENIFGGLPSEITVWENHNDEIINLPDDFTLAASSATCQVQGFYHK--TRPIYATQFHPEVEHT--QYGRDIFRNFIGICASYRE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49008 for 1453 contacts (-33.7/contact) +
2D Compatibility (PS) -18870 + (NN) -7123 + (LL) 4192
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -80109.0 ( -55.13 by residue)
QMean score : 0.402
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