Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRVIGKQGRIAKAIRTLVYAV--------------GSKNDKKIR--------LEIIE-------------- |
2L3N Chain:A ((1-104)) | ----SVSILRSSVNHRE----VDEAIDNILRYTNSTEQQFLEAMESTGGRVRIAIAKLLSKQTSGGSGGSKLGGSGGSRKDLSVKGMLYDSDSQQILNRLRERVSGSTAQSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L3N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9576 for 331 contacts (28.9/contact) +
2D Compatibility (PS) -6847 + (NN) 2775 + (LL) 1104
1D Compatibility (HY) -2800 + (ID) 950
Total energy: 2858.0 ( 8.63 by residue)
QMean score : 0.177
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