Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLQGKVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKAGVIGLTKTTARELAPRGINVNAVAPGFITTDMTDKLDEKTKEAMLAQIPLGAYGTTEDIANAVLFLASD-ASKYITGQTLSVDGGMVM |
4DMM Chain:C ((24-268)) | LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM---------EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120263 for 2124 contacts (-56.6/contact) +
2D Compatibility (PS) -25077 + (NN) 763 + (LL) 424
1D Compatibility (HY) -25200 + (ID) 6950
Total energy: -176303.0 ( -83.01 by residue)
QMean score : 0.553
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