Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGKNILLAVSGGIAVYKAVALTSKLTQAGANVKVMMTAHAQEFVPPLSFQVLSKNDVYTDTFDEKKSSVVAHIDLADWADLVIVAPATANVIGKMANGIADDMVTTTILATEAPVWVAPAMNVHMIQHPAVIRNINRLYADGVRFIEPEEGYLACGYVGRGRLEEPEKIVLRIAEFFQEDKNLLQGKNVLVTAGATREKLDPVRYFTNHSTGKMGFSIAESAARHGANVTLITTSKA-LPVPHGVEAIYVESAEEMHQAVNERKVSQDIFVMTAAVADYTPAQVSDQKIKKQPGD-FTIAMKRTKDILLEIGQHKTSEQV-----VIGFAAETENVEAN----ARKKLTSKNADMIVANNISEAGAGFSGDTNIVTFYRKDGSSEALPILDKKEVAEHIIKEAANFLRK |
| 4QJI Chain:B ((10-233)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAGVKALVTAGGTREPLDPVRFIGNRSSGKQGYAVARVLAQRGADVTLIAGNTAGLIDPAGVEMVHIGSATQLRDAVSKHAPDANVLVMAAAVADFRPAHVAAAKIKKGASEPSSIDLVRNDDVLAGAVRARADGQLPNMRAIVGFAAETGDANGDVLFHARAKLERKGCDLLVVN--------------DGWLLSADGTESALEHGSKTLMATRIVDSIAAFLK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76824 for 1571 contacts (-48.9/contact) +
2D Compatibility (PS) -21866 + (NN) -9489 + (LL) 14856
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -110523.0 ( -70.35 by residue)
QMean score : 0.581
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