Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQF--ETPIIANVAGATEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPEVAHRLTKAVKNVASVPVYVKLSPNVADIVSIAQAIEAAGADGLTMINTL----LGMRIDLKTRKPIIA--NGTGGLSGPAIKPVAIRMIH--QVRAVSNIPIIGMGGVQTVDDVLEFLIAGADAVAVGT-MNFTDPFICPKLISELPKRMDALGISSLQDLKKERTNQ |
1JQV Chain:B ((11-304)) | ------------FANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVP-GKPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYF-DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPEDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKGYQSIADF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162887 for 2325 contacts (-70.1/contact) +
2D Compatibility (PS) -30264 + (NN) -13523 + (LL) 1496
1D Compatibility (HY) -14800 + (ID) 4750
Total energy: -224728.0 ( -96.66 by residue)
QMean score : 0.463
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