Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIMNSLLKQKEMVVKDWLTYYVSVDDPYIFTLKNDH-------RLMDETGFVLENLFIGMTED--LGKM-NAFARELGKAQFITS------------LGISRILFHIRLLEEFLLDYASEIKTKSANYRELYLFSIKLHQVFSSFTQNLIEGYTHANEQMIVQKENQIIKESTKLIWIAENVFLLPLIGKITDERAKQITETALFEVCEQPVNYLIIDLSGVQLESPNIGKYIEYFFSSLKLVGVTPIITGMQPQTAKVMVQANLTEQHGIKTFATLRQATKTLMKEKEARNAHK |
| 2VEB Chain:A ((46-191)) | ---GEVLEDQVEEILDTWYGFVGSHPHLLYY--FTSPDGTPNEKYL--AAVRKRFSRWILDTSNRSYDQAWLDYQYEIGLRHHRTKKNQTDNVESVPNIGYRYLVAFIYPITATMKPFLARKG---HTPEEVEKMYQAWFKATTLQVALWSYPYVK-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VEB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53389 for 785 contacts (-68.0/contact) +
2D Compatibility (PS) -13126 + (NN) -6109 + (LL) 13116
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -61458.0 ( -78.29 by residue)
QMean score : 0.325
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