Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFQLVATAASGLEAIVGKEVARLGYDPKVENGKVYFEGDLSAIARANLWLRVADRVKIVVGVFKATTFDELFEKTKALPWEDYLPLDAQFPVAGKSVKSTLYSVPDCQAIVKKAIVNRVSEKYRRSGRLMETGALFKLEVSILKDEVTLTIDTSGAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQIWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-----EDEYGVVVANPPYGERLEDEE------------AVRQLYREMGIVYKR-----MPTWSVYVLTSYELFEEVYGKKATKKRKLYNGYLRTDLYQYWGPRKPRPKKED |
| 3UFB Chain:A ((202-367)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKT--------------VED-----------REVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY-PRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTL-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63941 for 1093 contacts (-58.5/contact) +
2D Compatibility (PS) -16063 + (NN) -11701 + (LL) 17172
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -78633.0 ( -71.94 by residue)
QMean score : 0.460
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