Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LFELVNSYIDSLALFLAILFIQGMSFRKIRQYRPNWFQNGSRRLFLSILLGVYYGLAGIYFIYEGAYENNPVIYTNMRILILMVTSVFGGRIPLIFAYLVMLFGRISFDIASPTTSRYVILMTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVNNFDEGRILRGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPNMRFFTQQFGWIFTKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQF----SSILKNRTFPPRTMFARIGGEEFAVLLQNVGTEQAALIADFFREEVERAKFPYNPASGK----VTVSIGVASASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE |
2WB4 Chain:B ((287-449)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLP-----CRYGGEEFVVIMPDTALADALRIAERIRMHV--SGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82260 for 1153 contacts (-71.3/contact) +
2D Compatibility (PS) -17197 + (NN) -9489 + (LL) 20580
1D Compatibility (HY) -11200 + (ID) 3100
Total energy: -102666.0 ( -89.04 by residue)
QMean score : 0.457
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