Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPEITVRAKSKTYPVYINEFALEDIREKWTKSLAKFSHVFVLTDGHVAELHKAKLDAVLADLPVVTYYVAPNGEEAKTFRVYEDVMTKMIETGLDRKAVLIAFGGGVIGDLGGFVAATYMRGIPFYQVPTTVLAH-DSAVGGKVAINHPLGKNMIGNFYQPEAVIYDTQFFATLPERELRSGFAEMIKHALISDLTLLRALMDTFTEPKDFYTKDLTPFLQRGIEIKANIVAQDETEQGVRAYLNFGHTFGHALEAYGNFGKWLHGEAITYGMIYALTMSETIYGLDFDLAE-FKTWLEQLGYDTTFDASVPFSKILENMRHDKKTTFNEISMVLLEEIGKP-VIFKADDDLIFETYKRVMRKGGNVI
3QBD Chain:B ((78-366))----------------------------------------------------------------------PDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFIADPVILDLIEADPQAALDPAGDVLPELIRRAITVKAEVVAA-----ELREILNYGHTLGHAIERRERY-RWRHGAAVSVGLVFAAELARLAGRLDDATAQRHRTILSSLGLPVSYDPDA-LPQLLEIMA--------VLRFVVLDGLAKPGRMVGPDPGLLVTAYAGVC-------


General information:
TITO was launched using:
RESULT:

Template: 3QBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -197934 for 2243 contacts (-88.2/contact) +
2D Compatibility (PS) -29065 + (NN) -8072 + (LL) 6732
1D Compatibility (HY) -24000 + (ID) 4750
Total energy: -257089.0 ( -114.62 by residue)
QMean score : 0.601

(partial model without unconserved sides chains):
PDB file : Tito_3QBD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QBD-query.scw
PDB file : Tito_Scwrl_3QBD.pdb: