Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDNHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSEIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKIFFAPNDPITEEMKKSDPSIESNYDTAVKTAKDIDTNMKIVPVKTFQDAVDYLKKLQ |
| 3K1J Chain:A ((480-578)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGVEGDAASISVATAVISALEGIPIR--QDVAMTGSLSVRGEVLPIGGATPAIEAAIEAGIKMVIIPKSNE---------------KDVF-LSKDKAEKIQIFPVETIDEVLEIALE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31183 for 694 contacts (-44.9/contact) +
2D Compatibility (PS) -10978 + (NN) -7958 + (LL) 15612
1D Compatibility (HY) -6400 + (ID) 1150
Total energy: -42057.0 ( -60.60 by residue)
QMean score : 0.429
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