Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPF-FDGDMVLDLFAGSGGLGIEALSRGAERAVFIDQAALAIKTIRQNLEGCHFTERAEVYRNDAERALKLLHKNEWKFDLIFLDPPYKKQQLEKLIGTLEKLELVNENGRIICEHDKEAIMPDTIGKFEKIKSVSYGITVLSIFEFQEA
1WS6 Chain:A ((16-183))
VRILGGKARGVALKVPA--SARPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEG-WEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMAPPYAMDLA-ALFGELLASGLVEAGGLYVLQHPKDLYLP-------LGERRVYGENALTLV-----
General information:
TITO was launched using:
RESULT:
Template:
1WS6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45284 for 1352 contacts (-33.5/contact) +
2D Compatibility (PS) -17391 + (NN) -5754 + (LL) 1152
1D Compatibility (HY) -2800 + (ID) 1850
Total energy: -71927.0 ( -53.20 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_1WS6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WS6-query.scw
PDB file :
Tito_Scwrl_1WS6.pdb
: