Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VGGLMKKNTLILGIESSCDETAASVVKNGNEIISSVVASQIESHKRFGGVVPEIASRHHVEQITLVIEEALKQANVTMDDLDGVAVTEGPGLVGALLIGVNAAKTLAFMHNLPLVGVHHIAGHIYANRFETEFKFPLLSLVVSGGHTELVLMKADNEFEIIGETRDDAAGEAYDKVARTLGLAYPGGVQIDKLAKDGEDTFHFPRAMMDEGSFDFSFSGLKSSFINTLHNLRQRGEEPNPNDMAASFQASVVDVLVSKTIRAAKQYDVKQLLLAGGVAANQGLRERLIQEVKLELPETELIIPPLALCGDNAAMIAAAGTVSFLQGKRSGFDMNANPGLLLEDI |
2IVO Chain:C ((2-301)) | ---------LALGIEGTAHTLGIGIVSE-DKVLANVFDT-LTTEK--GGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKM-FGVKDP-VGLYVSGGNTQVLALEG-GRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGEKYIELPYAVK---GMDLSFSGLLTEAIRKYRSGKYRVE-----DLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREML--RIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAG------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -207171 for 2705 contacts (-76.6/contact) +
2D Compatibility (PS) -32685 + (NN) -14226 + (LL) 1220
1D Compatibility (HY) -20800 + (ID) 5550
Total energy: -279212.0 ( -103.22 by residue)
QMean score : 0.487
|
|
|