Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VTLELHNVTKKFG----TKVAVNDLSFRVEPGKILGLIGQNGAGKTTTFRLILHFLEATSGKITWDGKEVSKIDPNI-------IGYLPEERGLYPNVTIEEQLIFFAELKGYPKQKIKAEIDSWLERAEIVGKKTDLIKTLSKGNQQKIQLLSTIIHQPKLVILDEPFSGLDPVNAEILKKFVFDLRAS-GAAIIFSSHRMENVEELCDSLLMLKKGNVVLQGTTESVK----SVFGRKRILIESSHSAAELATLPGVLNVQTHRDGVLQLEIAHESDAEKIFDYVTKDGFIQTFSLQAPTLEEIFKWKAGELNE------------------------- |
3TUZ Chain:H ((23-362)) | HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNV-NNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136846 for 2256 contacts (-60.7/contact) +
2D Compatibility (PS) -31382 + (NN) -1905 + (LL) 120
1D Compatibility (HY) -16400 + (ID) 3500
Total energy: -189913.0 ( -84.18 by residue)
QMean score : 0.368
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