Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLTEMLQIKYPILQGAMAQIATYELASAVSNAGGLGIIASGGMSADALREQIRLCKEKTTKPFAVNIMLMMPNC--------------------------------------PELVDVIIEEDVRVVTTGAGTP-KPFMEKFKAAGIKVIAVIPSVKIAQKMEEIGVDAVVAEGTEAGGHVG---------ETTTMALVRQVVSAVNIPVIAAGGIADGHGMAAVYALGASGVQIGTLFLVAEECPVPASFKQAVLDATDTSTTVTGRRNGAPVRSIKNPMIQKYVELENENASRDKLEELTLGSLRKAVHEGDVENGSVMAGQICGMLTEIRSTSDIIENLMKESKQVASNLVIQ |
4QIU Chain:B ((10-290)) | --FTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGCRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMF-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186904 for 2007 contacts (-93.1/contact) +
2D Compatibility (PS) -25604 + (NN) -13848 + (LL) 5764
1D Compatibility (HY) -12000 + (ID) 4600
Total energy: -237192.0 ( -118.18 by residue)
QMean score : 0.567
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