Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKIKSFLGKSLTLVVLGVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDAATTNVNGEVRDELRDLQKLNKDMVGWLTIIDTEIDYPILQSKDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLVAHPTFSYESGLT-NYEVEIFAVYETTTDFYYIET-EFPETTDFEDYLQKVKQQSVYTSNVKVSGKDRIITLSTCDTEKDYEKGRMVIQGKLVTK |
3PSQ Chain:A ((21-206)) | ----------------------------------------------------------KKGVQFDDLLAINSDVMAWLTVKGTHIDYPIVQGENNLEYINKSVEGEYSLSGSVFLDYRNKVTFEDKYSLIYAHHMAGNVMFGELPNFRKKSFFNKHKEFSIETKTKQKLKINIFACIQTDAFDSLLFNPIDVDISSKNEFLNHIKQKSVQYREILTTNESRFVALSTCEDMT--TDGRIIVIGQIE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59661 for 1434 contacts (-41.6/contact) +
2D Compatibility (PS) -19565 + (NN) -5104 + (LL) 4236
1D Compatibility (HY) -15200 + (ID) 2850
Total energy: -98144.0 ( -68.44 by residue)
QMean score : 0.492
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