Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKLLEVKDLNISFHTYAGEVKAIRGVNFDLYKGETLAIVGESGSGKSVTTKSIMRLLPEGNSEIKSGQILFNGMDIAKAHEKQMQKIRGKDIAMIFQDPMTSLNPTMTIGKQISEPLIKHQKISKHEAHKTALRLLQLVGIANAEERIKQYPHQFSGGMRQRVVIAISLACNPQILIADEPTTALDVTIQAQILDLMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYGGKIVEIGTVDEIFYNPQHPYTWGLISSMPTLDTDDEELFVIPGTPPDLLHPPKGDAFAARNKYAMQIDLEEEPPLFKVSDTHYAATWLLHPDAPEVTPPDAVLRRQEQFAELHPGMQAVHAKGVEVE |
2OUK Chain:D ((23-262)) | --QMIDVHQLKKSF----GSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLL-----EDFDEGEIIIDGINL-KAKDTNLNKVR-EEVGMVFQR--FNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGL---KDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKV--------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2OUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -152515 for 1973 contacts (-77.3/contact) +
2D Compatibility (PS) -25597 + (NN) -8102 + (LL) 6672
1D Compatibility (HY) -21200 + (ID) 4200
Total energy: -204942.0 ( -103.87 by residue)
QMean score : 0.494
|
|
|