Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MNNIKQAIIKLETIL---------ENGNAIESGSFVKYSVIKNILSLLEKDQE--LKIIEMKVELNGVEDSIENATLLEKRLIEAKSLVEDLASTINSLEIKVK----------
1QU9 Chain:A ((2-128))
SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSVEVARLPKDVKIEIEAIAVRR
General information:
TITO was launched using:
RESULT:
Template:
1QU9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3434 for 524 contacts (-6.6/contact) +
2D Compatibility (PS) -9416 + (NN) 1717 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -13383.0 ( -25.54 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_1QU9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QU9-query.scw
PDB file :
Tito_Scwrl_1QU9.pdb
: