Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEKQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELEICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALSIVNVYGSIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRLAHSYHDDIVN
1TLQ Chain:A ((6-166))
--YTMNEMVDITKDMLNKRGVMIEDIARIVQKLQEKYNPNLPLSVCMENVEKVLNKREIIHAVLTGLALDQLAEQKLLPEPLQHLVETDEPLYGIDEIIPLSIVNVYGSIGLTNFGYLDKEKIGIIKELDE-SPDGIHTFLDDIVAALAAAAASRIAHTHQDLQ--
General information:
TITO was launched using:
RESULT:
Template:
1TLQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113125 for 1309 contacts (-86.4/contact) +
2D Compatibility (PS) -17031 + (NN) -6081 + (LL) 556
1D Compatibility (HY) -17200 + (ID) 4350
Total energy: -157231.0 ( -120.12 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_1TLQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TLQ-query.scw
PDB file :
Tito_Scwrl_1TLQ.pdb
: