Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQEL---VRLTEGTDLRVSAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDIDGALVGGASLEPASFLALLEAVK
3UWV Chain:B ((9-261))
MRTPIIAGNWKMNKTVQEAKDFVNALPT-LPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK
General information:
TITO was launched using:
RESULT:
Template:
3UWV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119278 for 2142 contacts (-55.7/contact) +
2D Compatibility (PS) -27563 + (NN) -13947 + (LL) -80
1D Compatibility (HY) -23600 + (ID) 7950
Total energy: -192418.0 ( -89.83 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3UWV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWV-query.scw
PDB file :
Tito_Scwrl_3UWV.pdb
: