Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLINIQKKLLPDVLMIMQKRYQILRSIYFSEPVGRRTLAGMLGMSERVLRGEVEFLKAQGLVEIASSGMTVTKEGLVVFRDLESVMNQLSGLHSMEEQLAKKLQIKKCLVVQGDSDDTPWVREEMGRVAVEQLDMALTEKRNIVAVMGGSTMATVAEMMTTDFAKGRELLFVPGRGGIGED-L-DNQANTICDKMATKTNTKHRVLYVPEQLGEE-AYRSLLKEPAIQEGLRLVQSANAIILGIGDALAM---AKRRHTGEDVLEKIIHRKAVGEAFGYYFDEQGEVVH---KVPTFGLQFEDLAQIPHIIAVAGGTSKAKAIKSYMKSAPKNTILITDEGAAKSLLKGSNTLLK |
| 2W48 Chain:A ((9-315)) | ---------------------LIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINY-------------------DYNENLWLEQQLKQKFGLKEAVVASS----EEEQLSAMGQHGALLVDRLLEPG-DIIGFSWGRAVRSLVENLPQRSQ-SRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHG-RYINCLVTNRETAELLLK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154140 for 2406 contacts (-64.1/contact) +
2D Compatibility (PS) -31819 + (NN) -14810 + (LL) 4192
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -210977.0 ( -87.69 by residue)
QMean score : 0.493
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