Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDIIINKSGLKG
4RYF Chain:I ((3-193))--LIPTVI--------AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDIIINK-----


General information:
TITO was launched using:
RESULT:

Template: 4RYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124967 for 1383 contacts (-90.4/contact) +
2D Compatibility (PS) -19819 + (NN) -6340 + (LL) 376
1D Compatibility (HY) -26400 + (ID) 9150
Total energy: -186300.0 ( -134.71 by residue)
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_4RYF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RYF-query.scw
PDB file : Tito_Scwrl_4RYF.pdb: