Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIKKEHRDATHNCSAYIIGENDQYQKAHDDGEPSGTAGFPMLEILKKKSLKNVAVVVTRYFGGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPLLGKVENALELKAYQIDKKEFT--EKVVLHIFVDNDEL-QDFFNWITEISNGQLEYKEGPQKYREKDVT |
2YWE Chain:A ((404-485)) | -----------------------------------------------------------------------------------------------------------------------------------EEPFVLVTIITPKEYVGPIIQLCQEKRGIQKNMTYLDPNTVYLEYEMPLSEIIVDFHDKIKSISRGFASYDYEFIGYRPSDL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32617 for 535 contacts (-61.0/contact) +
2D Compatibility (PS) -8490 + (NN) 137 + (LL) 9216
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -36154.0 ( -67.58 by residue)
QMean score : 0.561
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